PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G064600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 279aa    MW: 31342.9 Da    PI: 9.9245
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G064600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH391.4e-12111158355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        + h ++Er RR+++ + f  L +++P +     +K++Ka+iL  A++Y+k+L+
  Aqcoe6G064600.1.p 111 TEHAMAERIRREKLSQHFTALSSIVPGL-----TKMDKASILGTAIKYLKKLE 158
                        579************************9.....9****************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.135108157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.8E-16111171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-10111158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.44E-15112171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.86E-12113159No hitNo description
SMARTSM003535.1E-13114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MNNKSTFSFT PIETSQTCFE SSRNPDVKSH DHWNSSNTMK SSSSVKKDVS CSSKVLSFGS  60
LESPKSSHKF NGNFIGVKRP KEEIESIGYM TFDLPDVMIS QSSRSSQGST TEHAMAERIR  120
REKLSQHFTA LSSIVPGLTK MDKASILGTA IKYLKKLEER AKMLEEKTTK KKTESVVYVN  180
KSKKKSNGWY DENLPEVEAR VSTNSVMLRV HCEKHKGVLV NILAEIEKFH LTVVSSSIMP  240
FGKFALEISV TAQMDVEFNM TEKDLVTNLR SAFLQFMR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A067FXL56e-70A0A067FXL5_CITSI; Uncharacterized protein
STRINGVIT_00s0824g00020.t012e-63(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-38bHLH family protein